Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Gm28911-201ENSMUST00000188837 117 ntBASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Gm6983-201ENSMUST00000214912 628 ntBASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.29■□□□□ 0.04
Nr2e3Q9QXZ7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Gm12490-201ENSMUST00000120255 560 ntBASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Gm2495-201ENSMUST00000191160 466 ntBASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Nr2e3Q9QXZ7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gm15371-201ENSMUST00000117057 784 ntBASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nr2e3Q9QXZ7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.27■□□□□ 0.03
Nr2e3Q9QXZ7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nr2e3Q9QXZ7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Nr2e3Q9QXZ7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Nr2e3Q9QXZ7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nr2e3Q9QXZ7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms