Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf3Q9QXK7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gm27892-201ENSMUST00000185017 106 ntBASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gm5356-201ENSMUST00000093326 615 ntBASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.52□□□□□ -0.09
Cpsf3Q9QXK7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm5687-201ENSMUST00000118252 640 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Mir1894-201ENSMUST00000122802 81 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm26315-201ENSMUST00000083890 321 ntBASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf3Q9QXK7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf3Q9QXK7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms