Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rtp4Q9ER80 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gm8602-201ENSMUST00000184045 607 ntBASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gm44608-201ENSMUST00000206827 855 ntBASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rtp4Q9ER80 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Gm19087-201ENSMUST00000191430 946 ntBASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Gm18027-201ENSMUST00000218947 619 ntBASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rtp4Q9ER80 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rtp4Q9ER80 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms