Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpsf1Q9EPU4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gm19931-201ENSMUST00000198920 368 ntBASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpsf1Q9EPU4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Gm14723-201ENSMUST00000118686 215 ntBASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Gm6222-202ENSMUST00000182143 629 ntBASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Gm6458-201ENSMUST00000211573 635 ntBASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cpsf1Q9EPU4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Gm11591-201ENSMUST00000120063 702 ntBASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Gm12539-201ENSMUST00000121549 1098 ntBASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Gm27501-201ENSMUST00000183599 107 ntBASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf1Q9EPU4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Gm4768-201ENSMUST00000206199 686 ntBASIC18.4■□□□□ 0.54
Cpsf1Q9EPU4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms