Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gm13597-201ENSMUST00000121239 375 ntBASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Paupar-201ENSMUST00000194826 3482 ntBASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Gm2651-201ENSMUST00000203560 838 ntBASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Hmgn3Q9DCB1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgn3Q9DCB1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms