Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gm7153-201ENSMUST00000117092 455 ntBASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmg20aQ9DC33 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmg20aQ9DC33 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Hmg20aQ9DC33 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hmg20aQ9DC33 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmg20aQ9DC33 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.33□□□□□ -0.43
Hmg20aQ9DC33 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Hmg20aQ9DC33 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hmg20aQ9DC33 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms