Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rrp8Q9DB85 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm43133-201ENSMUST00000197472 463 ntBASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm43118-201ENSMUST00000199149 775 ntBASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm9368-201ENSMUST00000219348 831 ntBASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Snora73a-201ENSMUST00000082453 205 ntBASIC13.22□□□□□ -0.29
Rrp8Q9DB85 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rrp8Q9DB85 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.21□□□□□ -0.29
Rrp8Q9DB85 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Gm25927-201ENSMUST00000175058 117 ntBASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rrp8Q9DB85 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rrp8Q9DB85 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rrp8Q9DB85 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms