Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm24543-201ENSMUST00000103867 82 ntBASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm15460-201ENSMUST00000118147 391 ntBASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm21470-201ENSMUST00000187680 696 ntBASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp5Q9D7S9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm4995-201ENSMUST00000117247 432 ntBASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp5Q9D7S9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gm43474-201ENSMUST00000196415 774 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gm44335-201ENSMUST00000196879 141 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gm44297-201ENSMUST00000198304 141 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gm44346-201ENSMUST00000198851 141 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp5Q9D7S9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Chmp5Q9D7S9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp5Q9D7S9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp5Q9D7S9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Gm22065-201ENSMUST00000103753 110 ntBASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Gm22066-201ENSMUST00000103761 110 ntBASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Gm24932-201ENSMUST00000103763 110 ntBASIC16.89■□□□□ 0.29
Chmp5Q9D7S9 Gm24115-201ENSMUST00000103799 110 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms