Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gm18737-201ENSMUST00000173594 937 ntBASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 AA619741-201ENSMUST00000195095 646 ntBASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Chaf1bQ9D0N7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Gm5364-201ENSMUST00000216789 889 ntBASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chaf1bQ9D0N7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm37714-201ENSMUST00000194742 342 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm18057-201ENSMUST00000208220 503 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Mir125a-201ENSMUST00000083545 68 ntBASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chaf1bQ9D0N7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chaf1bQ9D0N7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chaf1bQ9D0N7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chaf1bQ9D0N7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chaf1bQ9D0N7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.68□□□□□ -0.38
Chaf1bQ9D0N7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms