Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm14716-201ENSMUST00000120138 718 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm27839-201ENSMUST00000184242 106 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm27892-201ENSMUST00000185017 106 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm18187-201ENSMUST00000196476 984 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Otud1Q9CUB6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.81□□□□□ -0.36
Otud1Q9CUB6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Otud1Q9CUB6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Gm14127-201ENSMUST00000117906 678 ntBASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Otud1Q9CUB6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms