Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retreg3Q9CQV4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm10925-201ENSMUST00000189941 678 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm45384-201ENSMUST00000210451 277 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 CT010480.1-201ENSMUST00000223612 363 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retreg3Q9CQV4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retreg3Q9CQV4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retreg3Q9CQV4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retreg3Q9CQV4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Retreg3Q9CQV4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm11893-201ENSMUST00000117829 491 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm8988-201ENSMUST00000155015 1240 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm28760-201ENSMUST00000185995 736 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm37863-201ENSMUST00000194911 1457 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 AC132433.1-201ENSMUST00000221553 1101 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.77□□□□□ -0.21
Retreg3Q9CQV4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms