Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm4899-201ENSMUST00000178708 719 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm6550-201ENSMUST00000187574 993 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm10154-201ENSMUST00000084445 354 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RTRAFQ9CQE8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gm12882-201ENSMUST00000121696 517 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gm5479-201ENSMUST00000160578 435 ntBASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RTRAFQ9CQE8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms