Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ska1Q9CPV1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22065-201ENSMUST00000103753 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22066-201ENSMUST00000103761 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24932-201ENSMUST00000103763 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24115-201ENSMUST00000103799 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22190-201ENSMUST00000103827 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22191-201ENSMUST00000103831 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24721-201ENSMUST00000103849 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm28018-201ENSMUST00000103869 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm26399-201ENSMUST00000103937 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm4995-201ENSMUST00000117247 432 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25349-201ENSMUST00000177728 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm23616-201ENSMUST00000177797 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25871-201ENSMUST00000177816 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24752-201ENSMUST00000178240 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24496-201ENSMUST00000178287 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25649-201ENSMUST00000178476 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25548-201ENSMUST00000178681 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm23147-201ENSMUST00000178841 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm26095-201ENSMUST00000179270 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22171-201ENSMUST00000179283 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm23936-201ENSMUST00000179354 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm22619-201ENSMUST00000179516 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25255-201ENSMUST00000179579 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24755-201ENSMUST00000179691 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm26506-201ENSMUST00000179692 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm25086-201ENSMUST00000179931 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm23243-201ENSMUST00000180047 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ska1Q9CPV1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ska1Q9CPV1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms