Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm2810-201ENSMUST00000118681 990 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm12260-201ENSMUST00000122447 411 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Psmb5-202ENSMUST00000227257 622 ntBASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Krt88Q9CPR6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Mir874-201ENSMUST00000104769 76 ntBASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.19□□□□□ -0.46
Krt88Q9CPR6 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.19□□□□□ -0.46
Krt88Q9CPR6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Krt88Q9CPR6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Krt88Q9CPR6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms