Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mir698-201ENSMUST00000102164 109 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm6912-201ENSMUST00000117218 544 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Mir6977-201ENSMUST00000184960 64 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Thoc7-209ENSMUST00000225325 765 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.47□□□□□ -0.25
Trim33Q99PP7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm7730-201ENSMUST00000212486 454 ntBASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.47□□□□□ -0.25
Trim33Q99PP7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim33Q99PP7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm22189-201ENSMUST00000103822 86 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm15240-201ENSMUST00000118156 720 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm44855-201ENSMUST00000205725 362 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gm9797-201ENSMUST00000052902 613 ntBASIC13.46□□□□□ -0.25
Trim33Q99PP7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim33Q99PP7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms