Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim8Q99PJ2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Mir1895-201ENSMUST00000122615 79 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Gm6916-202ENSMUST00000205523 195 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Dupd1-202ENSMUST00000224735 548 ntBASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim8Q99PJ2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim8Q99PJ2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm9719-201ENSMUST00000162765 543 ntBASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm18041-201ENSMUST00000218210 618 ntBASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim8Q99PJ2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim8Q99PJ2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms