Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm8738-201ENSMUST00000172606 329 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm27341-201ENSMUST00000183570 106 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm28693-202ENSMUST00000190758 331 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm30285-201ENSMUST00000214614 422 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.61■□□□□ 0.25
RtcbQ99LF4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RtcbQ99LF4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm13316-201ENSMUST00000140537 691 ntBASIC16.6■□□□□ 0.25
RtcbQ99LF4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm22902-201ENSMUST00000158488 302 ntBASIC16.6■□□□□ 0.25
RtcbQ99LF4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm45186-201ENSMUST00000206874 478 ntBASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.6■□□□□ 0.25
RtcbQ99LF4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RtcbQ99LF4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms