Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cstf1Q99LC2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cstf1Q99LC2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm14381-201ENSMUST00000122105 414 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm37259-201ENSMUST00000193903 849 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gm24447-201ENSMUST00000083977 338 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cstf1Q99LC2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cstf1Q99LC2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Mir698-201ENSMUST00000102164 109 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm2991-201ENSMUST00000173338 480 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm2383-201ENSMUST00000181461 807 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cstf1Q99LC2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms