Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lims1Q99JW4 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.36□□□□□ -0.43
Lims1Q99JW4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Gm8410-201ENSMUST00000117225 605 ntBASIC12.35□□□□□ -0.43
Lims1Q99JW4 Gm15770-201ENSMUST00000117498 584 ntBASIC12.35□□□□□ -0.43
Lims1Q99JW4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.35□□□□□ -0.43
Lims1Q99JW4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lims1Q99JW4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lims1Q99JW4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm15240-201ENSMUST00000118156 720 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm15393-201ENSMUST00000120499 219 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm45841-201ENSMUST00000207700 164 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.34□□□□□ -0.43
Lims1Q99JW4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lims1Q99JW4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lims1Q99JW4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lims1Q99JW4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.33□□□□□ -0.43
Lims1Q99JW4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Lims1Q99JW4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms