Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Smarcd2Q99JR8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm13786-201ENSMUST00000122371 333 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm6222-202ENSMUST00000182143 629 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm45865-201ENSMUST00000211815 945 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm10608-202ENSMUST00000213924 676 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd2Q99JR8 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd2Q99JR8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm15236-201ENSMUST00000117309 379 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm6023-201ENSMUST00000118217 606 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm11637-201ENSMUST00000120601 592 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm6334-201ENSMUST00000207083 228 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms