Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhac1Q91Y10 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gm27680-201ENSMUST00000184192 160 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gm29741-201ENSMUST00000192667 421 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Shd-206ENSMUST00000225145 998 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhac1Q91Y10 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gm17837-201ENSMUST00000186435 985 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gm37714-201ENSMUST00000194742 342 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gm6888-201ENSMUST00000221983 706 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhac1Q91Y10 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gm12428-201ENSMUST00000119844 727 ntBASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Mir1897-201ENSMUST00000122581 272 ntBASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhac1Q91Y10 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms