Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.45■□□□□ 0.06
Trex1Q91XB0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trex1Q91XB0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.44■□□□□ 0.06
Trex1Q91XB0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Gm43133-201ENSMUST00000197472 463 ntBASIC15.44■□□□□ 0.06
Trex1Q91XB0 Gm9257-201ENSMUST00000221254 232 ntBASIC15.44■□□□□ 0.06
Trex1Q91XB0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trex1Q91XB0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.43■□□□□ 0.06
Trex1Q91XB0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.43■□□□□ 0.06
Trex1Q91XB0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trex1Q91XB0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.42■□□□□ 0.06
Trex1Q91XB0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.42■□□□□ 0.06
Trex1Q91XB0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.42■□□□□ 0.06
Trex1Q91XB0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.42■□□□□ 0.06
Trex1Q91XB0 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.42■□□□□ 0.06
Trex1Q91XB0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trex1Q91XB0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trex1Q91XB0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms