Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.01□□□□□ -0.17
Trim60Q8VI40 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim60Q8VI40 Gm45003-201ENSMUST00000205875 2158 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm14822-201ENSMUST00000122247 291 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14□□□□□ -0.17
Trim60Q8VI40 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14□□□□□ -0.17
Trim60Q8VI40 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm3436-201ENSMUST00000179930 840 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim60Q8VI40 Chchd1-203ENSMUST00000224633 557 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14□□□□□ -0.17
Trim60Q8VI40 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm45242-201ENSMUST00000210666 2129 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Gm45638-201ENSMUST00000211507 2878 ntBASIC14□□□□□ -0.17
Trim60Q8VI40 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim60Q8VI40 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trim60Q8VI40 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.99□□□□□ -0.17
Trim60Q8VI40 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim60Q8VI40 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms