Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm21880-201ENSMUST00000187275 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21826-201ENSMUST00000187451 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21198-201ENSMUST00000188393 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21749-201ENSMUST00000189343 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21901-201ENSMUST00000189568 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm29424-201ENSMUST00000189716 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm28599-201ENSMUST00000189838 694 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21867-201ENSMUST00000189917 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm29269-201ENSMUST00000190087 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21722-201ENSMUST00000190153 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm28423-201ENSMUST00000190701 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21899-201ENSMUST00000190745 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21910-201ENSMUST00000191163 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21849-201ENSMUST00000191571 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm28678-201ENSMUST00000191593 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm20910-201ENSMUST00000193268 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21871-201ENSMUST00000194621 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 BC001981-202ENSMUST00000191393 1545 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Syt7-205ENSMUST00000224135 1557 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gm9727-201ENSMUST00000161387 555 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpa1Q8VEE4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rpa1Q8VEE4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms