Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkd2Q8VE28 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gm15824-201ENSMUST00000119516 955 ntBASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gm15806-201ENSMUST00000120696 955 ntBASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gm9002-201ENSMUST00000178437 499 ntBASIC12.38□□□□□ -0.43
Nkd2Q8VE28 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkd2Q8VE28 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gm6916-202ENSMUST00000205523 195 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkd2Q8VE28 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd2Q8VE28 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd2Q8VE28 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd2Q8VE28 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkd2Q8VE28 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms