Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm15678-201ENSMUST00000117573 960 ntBASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm17271-201ENSMUST00000165535 355 ntBASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm45612-201ENSMUST00000211320 160 ntBASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nup35Q8R4R6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nup35Q8R4R6 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Mir874-201ENSMUST00000104769 76 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.02□□□□□ -0.65
Nup35Q8R4R6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.02□□□□□ -0.65
Nup35Q8R4R6 Gm18049-201ENSMUST00000208909 581 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms