Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Gm6447-201ENSMUST00000118905 835 ntBASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Chmp7Q8R1T1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Gm2231-201ENSMUST00000125661 612 ntBASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Gm25261-201ENSMUST00000157416 134 ntBASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp7Q8R1T1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm16379-201ENSMUST00000161469 348 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm8762-201ENSMUST00000193486 339 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm18935-201ENSMUST00000212692 664 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp7Q8R1T1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms