Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.34□□□□□ -0.27
Treml1Q8K558 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Treml1Q8K558 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Treml1Q8K558 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Treml1Q8K558 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Treml1Q8K558 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Treml1Q8K558 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Treml1Q8K558 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gm27772-201ENSMUST00000184900 187 ntBASIC13.33□□□□□ -0.28
Treml1Q8K558 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.33□□□□□ -0.28
Treml1Q8K558 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.33□□□□□ -0.28
Treml1Q8K558 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.33□□□□□ -0.28
Treml1Q8K558 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.33□□□□□ -0.28
Treml1Q8K558 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Treml1Q8K558 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.33□□□□□ -0.28
Treml1Q8K558 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Treml1Q8K558 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.32□□□□□ -0.28
Treml1Q8K558 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gm18307-201ENSMUST00000206864 949 ntBASIC13.32□□□□□ -0.28
Treml1Q8K558 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.32□□□□□ -0.28
Treml1Q8K558 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Treml1Q8K558 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Treml1Q8K558 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.31□□□□□ -0.28
Treml1Q8K558 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.31□□□□□ -0.28
Treml1Q8K558 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Treml1Q8K558 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.31□□□□□ -0.28
Treml1Q8K558 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.31□□□□□ -0.28
Treml1Q8K558 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.31□□□□□ -0.28
Treml1Q8K558 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms