Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Gm15678-201ENSMUST00000117573 960 ntBASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Rps4l-201ENSMUST00000071745 943 ntBASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf4Q8K4J2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf4Q8K4J2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf4Q8K4J2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms