Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12403-201ENSMUST00000121384 959 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Matn2-206ENSMUST00000228570 2798 ntBASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf39Q8K2Z2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm12341-201ENSMUST00000119724 503 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm25925-201ENSMUST00000158314 306 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf39Q8K2Z2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms