Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm43138-201ENSMUST00000199123 708 ntBASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm5781-201ENSMUST00000219792 443 ntBASIC15.23■□□□□ 0.03
Syne4Q8CII8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.23■□□□□ 0.03
Syne4Q8CII8 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.23■□□□□ 0.03
Syne4Q8CII8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Syne4Q8CII8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.22■□□□□ 0.03
Syne4Q8CII8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.22■□□□□ 0.03
Syne4Q8CII8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Syne4Q8CII8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.21■□□□□ 0.03
Syne4Q8CII8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.21■□□□□ 0.03
Syne4Q8CII8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Gm24548-201ENSMUST00000158650 108 ntBASIC15.21■□□□□ 0.03
Syne4Q8CII8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.21■□□□□ 0.03
Syne4Q8CII8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.21■□□□□ 0.03
Syne4Q8CII8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syne4Q8CII8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Syne4Q8CII8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Syne4Q8CII8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms