Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox30Q8CGW4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.78□□□□□ -0.04
Sox30Q8CGW4 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox30Q8CGW4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox30Q8CGW4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox30Q8CGW4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox30Q8CGW4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms