Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab43Q8CG50 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.19□□□□□ -0.3
Rab43Q8CG50 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.19□□□□□ -0.3
Rab43Q8CG50 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm45880-201ENSMUST00000213041 853 ntBASIC13.19□□□□□ -0.3
Rab43Q8CG50 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.19□□□□□ -0.3
Rab43Q8CG50 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab43Q8CG50 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Gm19184-201ENSMUST00000196798 928 ntBASIC13.18□□□□□ -0.3
Rab43Q8CG50 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.18□□□□□ -0.3
Rab43Q8CG50 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.18□□□□□ -0.3
Rab43Q8CG50 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab43Q8CG50 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab43Q8CG50 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms