Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.74■□□□□ 0.27
Smc5Q8CG46 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smc5Q8CG46 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.73■□□□□ 0.27
Smc5Q8CG46 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.73■□□□□ 0.27
Smc5Q8CG46 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Gm3436-201ENSMUST00000179930 840 ntBASIC16.73■□□□□ 0.27
Smc5Q8CG46 Gm27397-201ENSMUST00000184997 107 ntBASIC16.73■□□□□ 0.27
Smc5Q8CG46 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.73■□□□□ 0.27
Smc5Q8CG46 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smc5Q8CG46 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm25948-201ENSMUST00000175334 112 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc5Q8CG46 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc5Q8CG46 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms