Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Gm3961-201ENSMUST00000204425 994 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim52Q8CDV4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gm3890-201ENSMUST00000182416 207 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gm37042-201ENSMUST00000193816 581 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gm38266-201ENSMUST00000194931 421 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gm4768-201ENSMUST00000206199 686 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim52Q8CDV4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim52Q8CDV4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm29396-201ENSMUST00000185659 716 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm43822-201ENSMUST00000200285 476 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm18935-201ENSMUST00000212692 664 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Cts7-204ENSMUST00000225321 1257 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim52Q8CDV4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Gm26185-201ENSMUST00000157692 266 ntBASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.57■□□□□ 0.24
Trim52Q8CDV4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim52Q8CDV4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms