Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Gm44344-201ENSMUST00000200287 129 ntBASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcpip1Q8CDG3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcpip1Q8CDG3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm43703-201ENSMUST00000200523 763 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm6888-201ENSMUST00000221983 706 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms