Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Pabpn1Q8CCS6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpn1Q8CCS6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpn1Q8CCS6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpn1Q8CCS6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm4482-201ENSMUST00000200876 742 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm45120-201ENSMUST00000208880 408 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm6781-201ENSMUST00000038304 1242 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Mirlet7i-201ENSMUST00000083472 85 ntBASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpn1Q8CCS6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Gm14704-201ENSMUST00000120300 874 ntBASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 H2-Q3-201ENSMUST00000172583 608 ntBASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Gm5733-201ENSMUST00000190232 939 ntBASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pabpn1Q8CCS6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gm14644-201ENSMUST00000116671 647 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gm6630-201ENSMUST00000119199 454 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gm10774-201ENSMUST00000188689 204 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gm18038-201ENSMUST00000197900 485 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpn1Q8CCS6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm15036-201ENSMUST00000118880 400 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm14585-201ENSMUST00000120713 634 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm25604-201ENSMUST00000158359 133 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC20.43■□□□□ 0.86
Pabpn1Q8CCS6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms