Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smim4Q8C1Q6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gm12585-201ENSMUST00000117307 290 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gm13385-201ENSMUST00000121089 220 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gm6736-201ENSMUST00000166583 948 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gm24420-201ENSMUST00000176676 59 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Gm27533-201ENSMUST00000183800 152 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim4Q8C1Q6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.33□□□□□ -0.59
Smim4Q8C1Q6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms