Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gm26464-201ENSMUST00000157094 305 ntBASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Gm11524-201ENSMUST00000119349 807 ntBASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Gm7730-201ENSMUST00000212486 454 ntBASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trub1Q8C0D0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
Trub1Q8C0D0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm15678-201ENSMUST00000117573 960 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Auts2-212ENSMUST00000178555 309 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Gm6218-201ENSMUST00000219812 628 ntBASIC13.95□□□□□ -0.18
Trub1Q8C0D0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trub1Q8C0D0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms