Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Gm43703-201ENSMUST00000200523 763 ntBASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Grk6-205ENSMUST00000224653 2976 ntBASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trerf1Q8BXJ2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.33□□□□□ -0.11
Trerf1Q8BXJ2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trerf1Q8BXJ2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gm8584-201ENSMUST00000171982 758 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trerf1Q8BXJ2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms