Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smg1Q8BKX6 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm8738-201ENSMUST00000172606 329 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Mir6546-201ENSMUST00000184460 62 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm37666-201ENSMUST00000194110 866 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm25545-201ENSMUST00000122673 323 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm44405-201ENSMUST00000198952 126 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm6458-201ENSMUST00000211573 635 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Smg1Q8BKX6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm26956-201ENSMUST00000182176 986 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm26361-201ENSMUST00000158868 186 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm25700-201ENSMUST00000177693 110 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm27046-201ENSMUST00000182160 463 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm4768-201ENSMUST00000206199 686 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm19640-201ENSMUST00000214849 464 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smg1Q8BKX6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.15□□□□□ -0.62
Smg1Q8BKX6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smg1Q8BKX6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smg1Q8BKX6 Gm23270-201ENSMUST00000104055 131 ntBASIC11.15□□□□□ -0.62
Smg1Q8BKX6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms