Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm25927-201ENSMUST00000175058 117 ntBASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gm9823-201ENSMUST00000051212 327 ntBASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcal1Q8BJL0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm14350-201ENSMUST00000116642 640 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm43133-201ENSMUST00000197472 463 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm43822-201ENSMUST00000200285 476 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm10146-201ENSMUST00000072739 309 ntBASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcal1Q8BJL0 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Gm7029-201ENSMUST00000173226 450 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Mir8109-201ENSMUST00000184375 117 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcal1Q8BJL0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcal1Q8BJL0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcal1Q8BJL0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms