Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf38Q8BI21 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm6415-201ENSMUST00000118488 348 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm8927-201ENSMUST00000181978 981 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gm3222-201ENSMUST00000071282 990 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf38Q8BI21 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf38Q8BI21 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf38Q8BI21 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm15693-201ENSMUST00000120470 637 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm25948-201ENSMUST00000175334 112 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.08□□□□□ -0.32
Rnf38Q8BI21 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms