Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm20553-201ENSMUST00000204205 844 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smndc1Q8BGT7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Gm8749-201ENSMUST00000117737 331 ntBASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Gm14042-201ENSMUST00000120139 833 ntBASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Gm18889-201ENSMUST00000174284 929 ntBASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Smndc1Q8BGT7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Mir6990-201ENSMUST00000183724 91 ntBASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gm43125-201ENSMUST00000201724 730 ntBASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms