Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Gm18935-201ENSMUST00000212692 664 ntBASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.91□□□□□ -0.02
Usp6nlQ80XC3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp6nlQ80XC3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Gm15236-201ENSMUST00000117309 379 ntBASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Usp6nlQ80XC3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms