Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.51□□□□□ -0.25
Rpp38Q80UU2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm45841-201ENSMUST00000207700 164 ntBASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm45668-201ENSMUST00000211271 493 ntBASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm15823-201ENSMUST00000064305 670 ntBASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpp38Q80UU2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.5□□□□□ -0.25
Rpp38Q80UU2 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpp38Q80UU2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Gm15371-201ENSMUST00000117057 784 ntBASIC13.49□□□□□ -0.25
Rpp38Q80UU2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms