Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pif1Q80SX8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pif1Q80SX8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Gm27572-201ENSMUST00000183702 255 ntBASIC12.52□□□□□ -0.41
Pif1Q80SX8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.52□□□□□ -0.41
Pif1Q80SX8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Gm5161-201ENSMUST00000075243 853 ntBASIC12.52□□□□□ -0.41
Pif1Q80SX8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pif1Q80SX8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.51□□□□□ -0.41
Pif1Q80SX8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.51□□□□□ -0.41
Pif1Q80SX8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.51□□□□□ -0.41
Pif1Q80SX8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.51□□□□□ -0.41
Pif1Q80SX8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pif1Q80SX8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms