Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vma21Q78T54 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Vma21Q78T54 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Vma21Q78T54 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Vma21Q78T54 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm8410-201ENSMUST00000117225 605 ntBASIC11.03□□□□□ -0.64
Vma21Q78T54 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm43474-201ENSMUST00000196415 774 ntBASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.03□□□□□ -0.64
Vma21Q78T54 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.03□□□□□ -0.64
Vma21Q78T54 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.03□□□□□ -0.64
Vma21Q78T54 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vma21Q78T54 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Vma21Q78T54 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vma21Q78T54 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Vma21Q78T54 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.02□□□□□ -0.65
Vma21Q78T54 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm15653-201ENSMUST00000119247 907 ntBASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.02□□□□□ -0.65
Vma21Q78T54 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm21470-201ENSMUST00000187680 696 ntBASIC11.02□□□□□ -0.65
Vma21Q78T54 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.02□□□□□ -0.65
Vma21Q78T54 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.02□□□□□ -0.65
Vma21Q78T54 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.02□□□□□ -0.65
Vma21Q78T54 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Vma21Q78T54 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Vma21Q78T54 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Vma21Q78T54 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.01□□□□□ -0.65
Vma21Q78T54 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Vma21Q78T54 Gm15460-201ENSMUST00000118147 391 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms