Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm13316-201ENSMUST00000140537 691 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm16505-201ENSMUST00000179981 232 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm37042-201ENSMUST00000193816 581 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Rps4l-202ENSMUST00000204242 789 ntBASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx55Q6ZPL9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm14726-201ENSMUST00000120623 896 ntBASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm8738-201ENSMUST00000172606 329 ntBASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx55Q6ZPL9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms