Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm5363-201ENSMUST00000211927 938 ntBASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.86□□□□□ -0.51
Snrnp40Q6PE01 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Gm16479-201ENSMUST00000121706 932 ntBASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Snrnp40Q6PE01 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snrnp40Q6PE01 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms